Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3CA9 Chain:A ((18-141))
--------SSLLVKKL--VESATTPMRGSEGAAGYDISSVED--VVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVL--AGVIDEDYTGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLD------------------
General information:
TITO was launched using:
RESULT:
Template:
3CA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96212 for 858 contacts (-112.1/contact) +
2D Compatibility (PS) -13674 + (NN) -7076 + (LL) 696
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -127966.0 ( -149.14 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_3CA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CA9-query.scw
PDB file :
Tito_Scwrl_3CA9.pdb
: