Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAG------TLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIP--NDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK |
2PVU Chain:A ((38-261)) | ------------------------------------------GATKKKVVVGTDAAFAPFEYMQKGKIVGFDVDLLDAVMKAAGLDYELKNI-GWDPLFASLQSKEVDMGIS-GITITDERKQ-S--YDFSD--------------PYFEATQVILVKQGSPVKNALDLKGKTIGVQNATTGQEAA--EKL----FGKG----PHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNP--NKKLQVIEDPKNFASEYYGMIFPK--NSELKAKVDEALKNVINSGKYTEIYKKWF--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -53028 for 1762 contacts (-30.1/contact) +
2D Compatibility (PS) -23429 + (NN) -7207 + (LL) 5320
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -90644.0 ( -51.44 by residue)
QMean score : 0.364
|
|
|