Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTVNVIGAGLAGSEAAYQLAERGIKVNLIEMRPVKQTPAHHTDKFAELVCSNSLRGNALTNGVGVLKEEMRRLNSIIIEAADKARVPAGGALAVDRHDFSGYITETLKNHENITVINEEINAIPDGYTIIATGPLTTETLAQEIVDITGKDQLYFYDAAAPIIEKESIDMDKVYLKSRYDKGEAAYLNCPMTEDEFNRFYDAVLEAEVAPVNSFEKEKYFEGCMPFEVMAERGRKTLLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGAQKEVIKLIPGLENVDIVRYGVMHRNTFINSPDVLNEKYELISQPNIQFAGQMTGVEGYVESAASGLVAGINLAHKILGKGEVVFPRETMIGSMAYYISHAKNNKNFQPMNANFGLLPSLETRIKDKKERYEAQANRALDYLENFKKTL----- |
| 4J33 Chain:A ((22-411)) | MSESVAIIGAGLVGCLAALAFSKEGYNVTLYDFRQDPRLD-------------TTKNKNLKSINLAISARGIDALKSIDPDACEHILQDMIPMKGRMIHDLKGRQESQLYGE--------------------AINSINRSVLNNSLLDELEKSTTELKFG--HKLVKIEWTDDKQICHFAIGTPHTEKYDFVIGCD--GAYSATRSQMQRKVEMDFSQEYMNLRYIELYIPPTEEFKPNYGGNFAI---------APDHLHIWPRHKFMLIALANSDGSFTSTFFGSKDQISDLITSKSRVREFLIENFPDIINIMDLDDAVKRFITYPKESL----VCVNCKPYDVPGGKAILLG-DAAHAM-----VPFYGQGMNCGFEDVRILMALLKKHSG-DRSRAFTEYTQTRHKDLVSITELAKRNYKEMSHDVTSKRFLLRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38277 for 3200 contacts (-12.0/contact) +
2D Compatibility (PS) -39332 + (NN) -1115 + (LL) 3676
1D Compatibility (HY) -4000 + (ID) 2950
Total energy: -81998.0 ( -25.62 by residue)
QMean score : 0.370
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