Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGGKFETVKRDGFLIEKGPDSFLARKPAGVGLVKDLGLEDKLIANATGRSYIYHQKA-LHPI---PEGS-VMGIPTDKEALLASTLVSEIGK--------ARALQEPT-MERNNQERDQALGDFFEARFG--KELVKTIIEPLLSGIYAGDIYKMSLRATFPQFEQTVKKYGNLMDGLKESSMQTTGTKATIGAFRTLEGGLDALPKAIAAALPKEN---LHTAKQATEIVKKNNAYEISFADGDKMEADGVIIAATHDALIHLLA-ETTT----EPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACTWVQKKWPHMVPKNKMLLRGFVGKAGETWLEQASDEAIVSAVLRDYAEIMDLHAAPLFYEVSRMKS------AMPQYLVNHQDRLKQLKKNI-KTDYPGVFFAGMSYE---GVGIPDCIAGAQTAAKELVDYLEEV |
| 2VVM Chain:A ((40-487)) | -WDVIVIGGGYCGLTATRDLTVA--GFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSPS---F--NFSRGVNHFQLRTNPTTSTYMTH-EAEDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGC--------M-------DCLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMRSW---TGIAYPF------NKLCYAI--GDGTTPAGNTHLVCFGNS--ANHI--QPDED-VRETLKAVGQLAPGTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSE---CLQGLREK-HGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187286 for 3668 contacts (-51.1/contact) +
2D Compatibility (PS) -43354 + (NN) -1019 + (LL) 1484
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -246325.0 ( -67.16 by residue)
QMean score : 0.436
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