Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGRKLIMSGGGRCN-VTN-RR------PAEEIIKHIPG------NGRFLYSAFHAFDNEDIIRFFERLGVALKEEDH------GRMF-PV--SNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYED-GHVKGVTLK--D--GQEISASAVIVAVGGKSVP------------------RTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDVSLSVLNAKGKPIITHQMDMIFTHFGVSGPAALRCSMFVLRELKKTGAGTVKMRLDLFPNVSAAELSKDVYKLLEEN--PKKALKNS--LSSLLQEKMLLFLLE-----KADLEETAEYKQVSPKKIEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQS--KLMEGLFFCGEILD-ING--YTGGYNITCALVTGHTAGAYAAEVSNA |
| 1Y0P Chain:A ((126-568)) | -TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDPALVKVLSS--HSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERVAKLDPSLKGFISTNQPGAVGDGLDVAENAGGALKDMQYIQAHPTLSVKGG-VMVTEAVR----------GNGAILVNREGKRFVNEITTR----DKASAAILAQT---G---KSAYLIF-DDSVRKSLSKIDKYIGLGVAPTADSLVKLGKMEGIDGKALTETVARYNSLVSSGKDTD-----FERP---NLPRALNEGNYYAIEVTP--GVHHTMGGVMIDTKA-EVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127241 for 3566 contacts (-35.7/contact) +
2D Compatibility (PS) -40323 + (NN) 943 + (LL) 2716
1D Compatibility (HY) -5200 + (ID) 4200
Total energy: -173305.0 ( -48.60 by residue)
QMean score : 0.420
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