Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MIKLRQLTKSFSG-QKVLDKLDLDIEKGQVVALVGASGAGKSTFLRSMNYLEEPDYGTIEIDDF-----------KVDFKSISKDDILTLRRKLAMVFQQFNLFERRTALDNVKEGLKIVKK-MSDQEATRIARDELAKVGLADREKYY--PRHLSGGQKQRVALARALAM-KPDVLLLDEPTSALDPELVGEVEKSIADAAKQGQTMVLVSHDMNFVYQVADKVLFLEK-GRILESGTPEQLFNHPLE-ERTKEFFASYNKSYL |
| 1B0U Chain:A ((5-261)) | NKLHVIDLHKRYGGHEVLK-GVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNG-QNINLVRDKDGQLKVADKNQLRLLRT-R-LTMVFQHFNLWSHMTVLENVMEAPIQVL-GLSKHDARERALKYLAKVGIDERAQG-KYPVHLSGGQQQRVSIARALAME-PDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH-QGKIEEEGDPEQVFGNP-QSPRLQQFLKGSLKKLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106006 for 1915 contacts (-55.4/contact) +
2D Compatibility (PS) -25778 + (NN) -9212 + (LL) 680
1D Compatibility (HY) -20800 + (ID) 5400
Total energy: -166516.0 ( -86.95 by residue)
QMean score : 0.579
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