Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALEVTDATFVEETKEGLVLIDFWATWCGPCRMQAPILEQLSQEIDEDELKILKMDVDENPETARQFGIMSIPTLMFKKDGEVVKQVAGVHTKDQLKAIIAELS
2VOC Chain:A ((4-103))
--VKATDQSFSAETSEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL
General information:
TITO was launched using:
RESULT:
Template:
2VOC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56477 for 745 contacts (-75.8/contact) +
2D Compatibility (PS) -10332 + (NN) -1806 + (LL) 276
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -81389.0 ( -109.25 by residue)
QMean score : 0.729
(partial model without unconserved sides chains):
PDB file :
Tito_2VOC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VOC-query.scw
PDB file :
Tito_Scwrl_2VOC.pdb
: