Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGPTTDADAAVPRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIASK-RIAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRFREITALEGEVATLSERLETRKLVERAKGLLQTKHGMTEPDAFKWIQRAAMDRRTTMKRVAEVVLETLGTPKDT
1SRR Chain:A ((4-115))
-------------EKILIVDDQSGIRILLNEVFNKEGYQTF-QAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAV--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78221 for 867 contacts (-90.2/contact) +
2D Compatibility (PS) -12457 + (NN) -8307 + (LL) 7428
1D Compatibility (HY) -10400 + (ID) 1650
Total energy: -103607.0 ( -119.50 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_1SRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SRR-query.scw
PDB file :
Tito_Scwrl_1SRR.pdb
: