Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE--RAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE--LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLN-DG--RVLRPRVVVGADGIASYVRRRLLDIDVER-R--PYPSPMLVGTFALAPCVAERNRL--YVDSQGGLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 1K0I Chain:A ((1-351)) | ---MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVH-EGVEIAFAGQRRRI-DLKRL--SGGKTVTVYGQTEVTRDLMEAREA-CGATTVYQAAEVRLHDLQ-GERPYVTFERDGERLRLDCDYIAGCDGFHGISRQ-SIPAERLKVFERVYPFGWLGLLAD-TPP--VSHELIYANHPR-GFALCSQRSATRSQYYVQVPLSEK--VEDWSD-ERFWTELKARLPSEVAEKLVTGPSLEK-SIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYR-EGR-GELLERYSAICLRRIWKAERFSWWMTSVLH--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212305 for 2876 contacts (-73.8/contact) +
2D Compatibility (PS) -35930 + (NN) -1462 + (LL) 2788
1D Compatibility (HY) -8000 + (ID) 3300
Total energy: -258209.0 ( -89.78 by residue)
QMean score : 0.384
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