Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQATCARIARRFVWRNRMPRRLFIGLFLLPLPLFAAPPKDELAYAVGARLGMRLQQEMPGLELSELLLGLRQAYRGEALEIPPERIEQLLLQHENATTETPRTTPAEARFLANEKARFGVRELTGGVLVSELRRGQGNGIGAATQVHVRYRGLLADGQVFDQSES---AEWFALD--SVIEGWRTALRAMPVGARWRVVIPSAQAYGHEGAGDLIPPDAPLVFEIDLLGFR |
2PBC Chain:A ((1-97)) | ---------------------------------------------------------------------------------------------------------------------------------------GSPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74437 for 644 contacts (-115.6/contact) +
2D Compatibility (PS) -9476 + (NN) -250 + (LL) 11372
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -82191.0 ( -127.63 by residue)
QMean score : 0.406
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