Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDGSVSDIKRGRAARNAKLASIPVGFAGRAALGLGKRLTGKSKDEVTAELMEKAANQLFTVLGELKGGAMKVGQALSVMEAAIPDEFGEPYREALTKLQKDAPPLPASKVHRVLDGQLGTKWRERFSSFN-DTPVASASIGQVHKAIWS-DGREVAVKIQYPGADEALRADLKTMQRMVGVLKQLSPGADVQGVVDELVERTEMELDYRLEAANQRAFAKAYHDHPRFQVPHVVASAPKVVIQEWIEGVPMAEIIRHGT----TEQRDLIGTLLAELTFDAPRRLGLMHGDAHPGNFMLLP--DGRMGIIDFGAVAPMPGGFPIELGMTIRLAREKNYDLLLPTMEKAGLIQRGRQVSVREIDEMLRQYVEPIQVEVFHYTRKWLQKMTVSQIDRSVAQIRTARQMDLPAKLAIPMRVIASVGAILCQLDAHVPIKALSEELIPGFAEPDAIVV |
| 1KOB Chain:A ((51-203)) | -------------------------------------------------------------------------------------------------------------------------------DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP----LDKYTVKNEISIMN-------------------------QLHHPKLINLHDAFEDKYEMV-----------LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG-LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59388 for 943 contacts (-63.0/contact) +
2D Compatibility (PS) -15890 + (NN) -8304 + (LL) 23592
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -68940.0 ( -73.11 by residue)
QMean score : 0.252
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