Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK-KKKIKREVKILENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEE---LYGYLKKYHIDLDPHFNDILGQ--HSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPCADNAVLSSGLTAAR |
| 4BGQ Chain:A ((12-300)) | -------------------------------------NKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFK---VKETTLRELKMLRTLK-QENIVELKEAFRRR--GKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN-DVLKLCDFGFARNLSE---------TRWYRSPELLLG-APYGKSVDMWSVGCILGELSDGQPL-FPGESEIDQLFTIQKVLGPLPSEQMKLFYS------NPRFHGLRFPAVNHPQSLERR----YLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQRL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127837 for 2001 contacts (-63.9/contact) +
2D Compatibility (PS) -27893 + (NN) -10902 + (LL) 5328
1D Compatibility (HY) -26000 + (ID) 4050
Total energy: -191354.0 ( -95.63 by residue)
QMean score : 0.629
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