Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMFQASMRSPNMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRPDEDLRNCESDTEEDIARRKALHPRRRSSTS
2JAM Chain:A ((6-290))-----------------NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK------------SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPE-ENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALH---RDIYPSVSLQIQKNFAKS---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -107978 for 2135 contacts (-50.6/contact) +
2D Compatibility (PS) -29187 + (NN) -8351 + (LL) 6696
1D Compatibility (HY) -25200 + (ID) 5350
Total energy: -169370.0 ( -79.33 by residue)
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_2JAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAM-query.scw
PDB file : Tito_Scwrl_2JAM.pdb: