Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MKHMLIAGGGIGGLSAAISLRKAGFSVTLCEAASENRKTGAGILQPQNALAVLKELGVFEDCCKHGFQTEWFKTFDEQGNLLFQVSESFLDDSLPGRNNILRKTLNDILMKHAEAVGVDIKWGKKVVAYEETAESVTALCEDGEKMQADILAGFDGIHSVVRDKMLQKETEKEHLGMGAWRFYI-----ELPDYTFEDATFMYRSGD--TQIGVVPLAQHAGYVFVLQPCTSDYWDEEDTRFDRVKEILSGFRGLDFVTKHMSKQHPVIFNKLEQVAVQEPWHKGRVIIGGDAAHAGAPTLAQGAAMAIEDAIVLAEELQNHADHETALQAYYKRRAPRALKVQNLSSEIVR-RRLK--GEPGAEELIGECYAVLREGY----
4H2Q Chain:A ((10-379))KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWM---HNKSVSKETF--NGLPWRI-MTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTL---QTGEVLEADLIVGADGVGSKVRDSIGFK-QDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAADPRGSSVPIDLEVWVEM---FPFLEPCLIEAAKLKTARYDKYETTKL-DSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPITDRCQALSGDYAANRSLSKGNMFTPAALEAARYDPLRRVYSWPQ


General information:
TITO was launched using:
RESULT:

Template: 4H2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2199 -199825 -90.87 -562.89
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -90.87
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_4H2Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H2Q-query.scw
PDB file : Tito_Scwrl_4H2Q.pdb: