Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVPARPTPLFADIADVSRRLAETGYLPDTATATAVFLADRLGKPLLVEGPAGVGKTELARAVAQATGSGLVRLQCYEGVDEARALY---------EWNHAKQILRIQAGSGDWEATKTDVFSEEFLLQRPLLT--AIRRTEPTVLLIDETDKADIEIEGLLLEVLSDFAVTVPELGTLTATRAPFVLLTS----------------------------NATRELSEALKRRCLYLHIDFPTPELERRILLSRVPELPEHFA------EELVRIIGVLRGMQLKKVPSIAETIDWGRTVLAL-GLDTIDDAVVAATLGVVLKHQSDQQRATGELRLN |
1G8P Chain:A ((18-350)) | -----RPVFPFSAIVG----------QEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101778 for 2076 contacts (-49.0/contact) +
2D Compatibility (PS) -28897 + (NN) -5072 + (LL) 1136
1D Compatibility (HY) -2000 + (ID) 2350
Total energy: -138961.0 ( -66.94 by residue)
QMean score : 0.364
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