Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINL-DPAAPIVVHRGDRIAQLLVQRVEL-VELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
4B0H Chain:A ((2-131))
-TMQIKIKYLDETQTRISKIEQGD-WIDLRAAEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALR-DTEIKKGDRICQFRIMKKMPAVELVEVEH-----L--G----------------
General information:
TITO was launched using:
RESULT:
Template:
4B0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91823 for 832 contacts (-110.4/contact) +
2D Compatibility (PS) -13958 + (NN) -3272 + (LL) 32
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -116371.0 ( -139.87 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_4B0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B0H-query.scw
PDB file :
Tito_Scwrl_4B0H.pdb
: