Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRG-ESPFTIAVGERIAQLVLVPVVQAHFELVEAF-----DESQRGAGGFGHSGSH
3HZA Chain:A ((29-171))
-----------RLDPGLPLPSRAHDGDAGVDLYSA--EDVELAPGRRALVRTGVAVAVPF-GMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGWGSSGGH
General information:
TITO was launched using:
RESULT:
Template:
3HZA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94208 for 865 contacts (-108.9/contact) +
2D Compatibility (PS) -14487 + (NN) -3659 + (LL) 992
1D Compatibility (HY) -7600 + (ID) 2750
Total energy: -121712.0 ( -140.71 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3HZA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZA-query.scw
PDB file :
Tito_Scwrl_3HZA.pdb
: