Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKVKRLEEFNTCYNSNQLEKMAFFQCREEVEKVKCFLEKNSGDQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD-AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK |
4MVF Chain:A ((50-315)) | ----------------------------------------------------------------------------------------------CHSGKLEDKYIID--EKLGQGTYGCVYKGIDKVTNQLYAIKEEKKDRLKNINRFFQEIEIMKKLDHPNIVKLYETYENDNYIYLIMELCSGRELFDSIIE-NGSFTEKNAATIMKQIFSAIFYLHSLNIVHRDLKPENFLFQSENKDSLLKIIDFGLSKNL-----------------------K-YDKKCDIWSSGVIMYTLLCGYPPFY----------------CFYENDWGSISSDAKNLITKLLTYNPNERCTIEEALNHPWITQMTKSHVELSSTLLKNLKNFKKENEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124253 for 1727 contacts (-71.9/contact) +
2D Compatibility (PS) -23468 + (NN) -1020 + (LL) 8720
1D Compatibility (HY) -21200 + (ID) 4350
Total energy: -165571.0 ( -95.87 by residue)
QMean score : 0.422
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