Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNI--TINDQTPELAEYF-GSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVY--MRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPD-VVATEEPARLLSQFIHGIKTLPVTWS |
| 3WVS Chain:A ((24-401)) | -------------------------------------ALSESYTRARDTDGLIRVKLP------YGEPAWLATRYEDARLVLGDA-RFSRALSEEHDPPR--ARKFNAQAKSMFNMDAPDHTRLRRLISKAFTIRRVEELRPKVHDLAHRLIDDMLAK-G-EPADLVADYALPIPTTVICELLGVPFEDREKFGRWTDAILSTSTLN---P-EEGRVKRMELVGYIGGIIAARRAQPADDLISGMIEARDVQDKLTEQELLDHCIGLLIAGHETTASQIPSFVYALLDQPQHWKRLLDDP-ELIPSAVEELFRFVPLGSGSAAPRYAREDIEVGGTLVRAGEPVLVALGAANRDGLRFEDPEEIKLDRPSNHHIGFGH-GIHHCLGAPLARLELQEALRALLERL-PTLKVAGDIAWKSEMMVRGPRSMPVGW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176299 for 3076 contacts (-57.3/contact) +
2D Compatibility (PS) -39417 + (NN) -12488 + (LL) 1912
1D Compatibility (HY) -16000 + (ID) 5900
Total energy: -248192.0 ( -80.69 by residue)
QMean score : 0.436
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