Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTVPARPTPLFADIADV---SRRLAE---TGYLPDTATATAVFLADRLGKP-------LLVEGPAGVGKTELARAVAQATGSG--LVRLQCYE----GVDEARALYEWNHAKQILRIQAGSGDWE-------------------------------------ATKTDVFSEEFLLQRPLLT-----AIRRTEPTVLLIDETDKADI-------------------EIEGLLLEVLSDFAVTVPELGTLTATRAPFVL-----LTSNATRELSEALKRR-----CLYLHIDFPT--------------PELERRILLSRVPELPEHFAEELVRIIGVLRGMQL--KKVPSIAE-----TIDWGRTVLALGLDTIDDA----VVAATLGVVLKHQSDQQRATGELRLN---- |
| 4WW4 Chain:A ((3-458)) | QISEVRGNTRDHRTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIGLRVRETKDVYEGEVSTLLIGLKSARGQKLDQKERVQVGDVIYIETNTGACRSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDVANARPDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPGVLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQVDVQDIAEAEELFLDARRSANILTSTGGLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103473 for 1958 contacts (-52.8/contact) +
2D Compatibility (PS) -30919 + (NN) -6350 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 3150
Total energy: -153492.0 ( -78.39 by residue)
QMean score : 0.359
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