Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRVAGQVNSRRGELLELAAAMFAERGLRATTVRDIADGAGILSGSLYHHFASKEEMVDELLRGFLDWLFARYRDIVD--STANPLERLQGLFMASFEAIEHHHAQVVIYQDEAQRLASQPRFSYIEDRNKQQRKMWVDVLNQGIEEGYFRPDLDVDLVYRFIRDTTWVSVR-WYRPGG-PLTAQQVGQQYLAIVLGGITKEGV
3G1L Chain:A ((42-234))
-------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATS-V-EVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
3G1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108613 for 1361 contacts (-79.8/contact) +
2D Compatibility (PS) -20028 + (NN) -7924 + (LL) 800
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -142515.0 ( -104.71 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3G1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1L-query.scw
PDB file :
Tito_Scwrl_3G1L.pdb
: