Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
3ARA Chain:A ((33-148))
--------------EHATAPTRGSARAAGYDLYSA--YDYTIPPMEKAVVKTDIQIALPS-GCYGRVAPRSGLAAK-HFI-DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQAL----------------
General information:
TITO was launched using:
RESULT:
Template:
3ARA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73661 for 754 contacts (-97.7/contact) +
2D Compatibility (PS) -12294 + (NN) -4681 + (LL) 984
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -97852.0 ( -129.78 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_3ARA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ARA-query.scw
PDB file :
Tito_Scwrl_3ARA.pdb
: