Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGHDWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK-
3Q93 Chain:A ((23-176))
ASRLYTLVLVLQPQRVLLGMKKR---GFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQGTP---VESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKK-FHGYFKFQGQDTILDYTLREVDTV
General information:
TITO was launched using:
RESULT:
Template:
3Q93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69032 for 1140 contacts (-60.6/contact) +
2D Compatibility (PS) -16678 + (NN) -4658 + (LL) 320
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -101248.0 ( -88.81 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_3Q93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q93-query.scw
PDB file :
Tito_Scwrl_3Q93.pdb
: