Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK----VPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDY-EQIK------IKKIEDASNPLLLKRRKKARALEAAALAH |
| 3LIJ Chain:A ((22-376)) | ---------------------------------------------ATPGMFITSKKGHLSEMYQR-VKKLGS---GEVLLCRDKVTHVERAIKIIRKSSNSKLLEEVAVLKLLD-HPNIMKLYDFFEDK----RNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT----DQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKES---LPSLAN-AIENMRK-FQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165506 for 2513 contacts (-65.9/contact) +
2D Compatibility (PS) -35406 + (NN) -15620 + (LL) 532
1D Compatibility (HY) -22000 + (ID) 5450
Total energy: -243450.0 ( -96.88 by residue)
QMean score : 0.555
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