Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPGPAAGSRARVYAEVNSLRSREYWDYEAHVPSWGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK----KKKIKREVKILENLRGGTNIIKLIDTVKDPV---SKTPALVFEYINNTDFKQLYQ--ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDIL---GQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPCADNAVLSSGLTAAR |
| 2B9H Chain:A ((7-314)) | ---------------------------------YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN-CDLKVCDFGLARIID-----VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI-FPGRDYRHQLLLIFGIIGTPHSDNDL---RCIESPRAREYIKSLPMYPAAPLEKMFP-----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146616 for 2199 contacts (-66.7/contact) +
2D Compatibility (PS) -29424 + (NN) -8192 + (LL) 2648
1D Compatibility (HY) -27200 + (ID) 4250
Total energy: -213034.0 ( -96.88 by residue)
QMean score : 0.645
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