Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKP---K------IQGSRIIPIEKYGLHTISIGYFIDKDCAAMWRGPMITKALYNLLMGTKWSDIEYLVVDTPPGTGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYNMFTKLSVPIFGIVENMSYFIQDNSKIYIFGKDGTKVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSED---LAGIYEDFAKDIRSFI |
1G3Q Chain:A ((2-236)) | ----------------------------------------------------------------------------------------------GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLPGAVDWEHVLK------ADPRKLPEVIKSLK-DKFDFILIDCPAGLQLDAMSAM--LSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSDRD----I----PPEAAEDVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEIEKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171009 for 2030 contacts (-84.2/contact) +
2D Compatibility (PS) -24098 + (NN) -11396 + (LL) 8048
1D Compatibility (HY) -7200 + (ID) 2600
Total energy: -208255.0 ( -102.59 by residue)
QMean score : 0.481
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