Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------MTPVTTFPLVDAILAGR--DRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVI--GIEQTSAGYAKIVGCA----LGFPVINIARSSAKLLYESPIIAARVTQTAFERTAGID-SSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPID--------LPNAIGGYDVIIGATGATSVPASMH-ELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV |
| 1K0U Chain:A ((2-431)) | DKLPYKVADIGLAAWGRKALDIAENEMPGLMRMREMYSASKPLKGARIAGCLHMTVETAVLIETLVALGAEVRWSSC--NIFSTQDHAAAAIAKAGIPV------FAWKGETDEEYLWCIEQT-------LHFKDGPLNMILDDGGDLTNLIHTKHPQLLSGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACKEGNIFVTTTGCVDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQ-------VDRYLLKNG------------------------------------------HRIILLAEGRL--------VNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNV----------------------KLTKLTEKQAQYLGMPINGPFKPDHYRY------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220086 for 3534 contacts (-62.3/contact) +
2D Compatibility (PS) -41225 + (NN) -3193 + (LL) 7744
1D Compatibility (HY) -14000 + (ID) 3700
Total energy: -274460.0 ( -77.66 by residue)
QMean score : 0.294
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