Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANS---VHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIAR--VAGEALEGARRFAAGAGRHGAPAPRAEQGDTL |
3PEA Chain:A ((4-260)) | MLKFLSVRVEDHIAVATLNHAP-ANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEK--RKPSFSG-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137728 for 2097 contacts (-65.7/contact) +
2D Compatibility (PS) -27593 + (NN) -9238 + (LL) 392
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -185967.0 ( -88.68 by residue)
QMean score : 0.547
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