Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQ-VMATREPGGIDIAEQIREVILNE---NNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDA-GQSKDLVVQDVLKVIDEALKKIQL
4TMK Chain:A ((2-211))
-RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARG--ELDRIEQESFDFFNRTRARYLELAAQD-KSIHTIDAT-QPLEAVMDAIRTTVTHWVKEL--
General information:
TITO was launched using:
RESULT:
Template:
4TMK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104075 for 1628 contacts (-63.9/contact) +
2D Compatibility (PS) -22778 + (NN) -10728 + (LL) 264
1D Compatibility (HY) -9200 + (ID) 3550
Total energy: -150067.0 ( -92.18 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_4TMK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TMK-query.scw
PDB file :
Tito_Scwrl_4TMK.pdb
: