Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELFKYMEKYDYEQLVFCQDEQSGLKAIIAIHDTTLGPALGGTRMWTYENEEAAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGDPRKD---KNEEMFRAFGRYIQGLNG--RYITAEDVGTTVEDMDIIHDETD---------YVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKAAFGTDSLEGKTIAVQGVGNVAYNLCRHLHEEGAN-LIVTDINKQSVQ-------RAVEDF---G------------ARAV-DPDDIYSQDCDIYAPCALGATINDDTIKQLKAKVIAGAANNQLKETRHGDQIHEMGIVYAPDYVINAGGVINVADELY-G-----YNAERALKKVE-GIYGNIERVLEISQ-RDGIPAYLAADRLAEERIERMRRSRSQFLQNGHSVLSRR
1V9L Chain:A ((53-420))-----------------------VFEGYRVQHCDVLGPYKGGVRFHPEVTLA----DDVALAILMTLKNSLAGLPYGGAKGAVRVDPKKLSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVAVATREMAKKLW--GGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIFKLDVDIFVPAAIENVIRGDNAGLVKARLVVEGANGPT-TPEAERILYERGVVVVPDILANAGGVIMSYLEWVENLQWYIWDEEETRKRLENIMVNNVERVYKRWQREKGWTMRDAAIVTALERIYNAMKIRGW------------


General information:
TITO was launched using:
RESULT:

Template: 1V9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1827 35709 19.55 110.90
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 19.55
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_1V9L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V9L-query.scw
PDB file : Tito_Scwrl_1V9L.pdb: