Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATYNADAI-EVLSGLDPVRKRPGMYTDTT---RPNHLAQEVIDNSVDEALAGHAKS----VQVILHQD-NSLEVIDDGRGMPVDIHPEEGVPGVELILTKLHAGGKFSNKNYQFSG-------GLHGVGISVVNALSTRVEVRVKRD--ANEYRMTFADGFKDSDLEVIGTVGKRNTGTSVHFW-------PDPKYFDSAKFSVSRLKHVLKAKAVLCPGLSVVFED-KNTGERVEWHFEDGLRSYLTDAVAELPRLPDEPFCGNLEGSKEAVSWALLWLPEGGESVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVVKDAFSLWLNEHAEIGLQLAELAISNAGRRLKAGKKVERKKITQGPALPGKLADCAGQEPMRAELFLVEGDSAGGSAKQARDKEFQAIMPLRGKILNTWEVDGGEVLASQEVHDIAVAIGVDPGASDLAQLRYGKICILADADSDGLHIATLLCALFVRHFRPLVEAGHVYVAMPPLYRIDLGKDIYYALDEAERDGILERLAAEKKRGKPQVTRFKGLGEMNPLQLRETTMDPNTRRLVQLTLEDATGTLEIMDMLLAKKRAGDRKSWLESKGNLAEVLV |
| 1KIJ Chain:A ((7-218)) | -------AIR-VLKGLEGVRHRPAMYIGGTGVEGYHHLFKEILDNAVDEALAG----YATEILVRLNE-DGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQ-------GAYKVSGGLHGVGASVVNALSEWTVVEVFREGKHHRIAFS--RGEVTEPLRVVGEAPRGKTGTRVTFKPDPEIFG------N-LRFDPSKIRARLREVAYLVAGLKLVFQDRQH--GKEEVFLDKG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65292 for 1383 contacts (-47.2/contact) +
2D Compatibility (PS) -20661 + (NN) -11367 + (LL) 29780
1D Compatibility (HY) -16400 + (ID) 4400
Total energy: -88340.0 ( -63.88 by residue)
QMean score : 0.448
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