Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTALNVLIYPDDHLKVVCEPVTKVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGETGIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLSPLKRQRIKEKLIKYKKQIAKS
1G27 Chain:A ((1-164))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL----
General information:
TITO was launched using:
RESULT:
Template:
1G27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94025 for 1263 contacts (-74.4/contact) +
2D Compatibility (PS) -17690 + (NN) -5045 + (LL) 592
1D Compatibility (HY) -19600 + (ID) 5400
Total energy: -141168.0 ( -111.77 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1G27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G27-query.scw
PDB file :
Tito_Scwrl_1G27.pdb
: