Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGLSHPSVFGRATHAVVRAPPESLCRHALRRSQGEEVDFARAERQHQLYVGVLGSKLGLQVVQLPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAV--STVPVADSLHLKS-FCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDMAANCIYLNIPSKGHVLLHRTPEEYPESAKVYEKLKDHLLIPVSNSEMEKVDGLLTCCSVFINKKTDS |
| 3BPB Chain:A ((4-252)) | --------------HIIARTPARSLV-DGLTSSHLGKPDYAKALEQHNAYIRALQT-CDVDITLLPPDERFPDSVFVEDPVLCTSRCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAILEKHGLSGSVVRLEKVLGLKTGLAYLEHNNLLAAGEFVSK-------PEFQDFNIIEIPEEESYAANCIWVN----ERVIM---PAGYPRTREKIARL-GYRVIEVDTSEYRKIDGGVSCMSL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135615 for 2144 contacts (-63.3/contact) +
2D Compatibility (PS) -26194 + (NN) -7764 + (LL) 2488
1D Compatibility (HY) -18000 + (ID) 4100
Total energy: -189185.0 ( -88.24 by residue)
QMean score : 0.385
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