Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPEETSVYLDYYYATSPNSDIRETHSHVPYTSVFLPVFYTAVFLTGVLGNLVLMGALHFKPGSRRLIDIFIINLAASDFIFLVTLPLWVDKEASLGLWRTGSFLCKGSSYMISVNMHCSVLLLTCMSVDRYLAIVWPVVSRKFRRTDCAYVVCASIWFISCLLGLPTLL---SRELTLIDDKPYCAEKKATPIKLIWSLVALIFTFFVPLLSIVTCYCCIARKLCAHYQQSGKHNKKLKKSIKIIFIVVAAFLVSWLPF------NTFKFLA-IVSGLRQEHYLPSAILQLGMEVSGPLAFANSCVNPFIYYIFDSYIRRAIVHCLCPCLKNYDFGSSTETSDSHLTKALSTFIHAEDFARRRKRSVSL |
| 4XT1 Chain:A ((48-313)) | ---------------------------------------YGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWM--QYLLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDNQCMTDYDYL--EVSYPIIL--NVELMLGAFVIPLSVISYCYYRISRIVAV---SQSRHKGRI---VRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALI-----LTESLAFCHCCLNPLLYVFVGTKFRQEL-HCLLAEFR-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244864 for 1806 contacts (-135.6/contact) +
2D Compatibility (PS) -25429 + (NN) -4625 + (LL) 6208
1D Compatibility (HY) -36800 + (ID) 3800
Total energy: -309310.0 ( -171.27 by residue)
QMean score : 0.216
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