Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDKNLRHRSSYFFLNLAISDFFVGVISIPLYIPHTLFEWDFGKEICVFWLTTDYLLCTASVYNIVLISYDRYLSVSNAVSYRTQHTGVLKIVTLMVAVWVLAFLVN-GPMILVSESWKDEGSECEPGFFSEWYILA-ITSFLEFVIPVILVAYFN------------MNIYWSLW--KRDHLSRCQS-----HPGLTAVSSNICGHSFRGRLSSRR--SLSASTEVPASFHSER------------QRRKSSLMFSSRTKMNSNTIASKMGSFSQSDSVALH-QREHVELLRARRLAKSLAILLGVFAVCWAPYSLFTIVLSFYSSATGPKSVWYR-IAFWLQWFNSFVNPLLYPLCHKRFQKAFLKIFCIKKQPLPSQHSRSVSS |
| 4EIY Chain:A ((41-423)) | ------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST-GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGT-RAKGIIAICWVLSFAIGLTPML----GWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK----------MKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIIN-CFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175790 for 2427 contacts (-72.4/contact) +
2D Compatibility (PS) -33687 + (NN) -8604 + (LL) 3968
1D Compatibility (HY) -31200 + (ID) 4300
Total energy: -249613.0 ( -102.85 by residue)
QMean score : 0.244
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