Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGNQTSITEFLLLGFPIGPRIQMLLFGLFSLFYIFILLGNGTILGLISLDSRLHTPMYFFLSHLAVVDIACACSTVPQMLVNLLHPAKPISFAGC--MTQMFLFLSFAHTECLLLVVMSYDRYVAICHPLRYSTIMTWKVCITLALTSWILGVLLALVHLVLLLPLSFCGPQKLNHFFCEIMAVLKLACADTHINEVMVLAGAVSVLVGAFFSTVISYVHILCAILKIQSGEGCQKAFSIC-SSH--LCVVGLFYGT--------AIIMYVEPQYESPKEQKKYLLL-FHSLFNPMLNPLIYSLRNKEVQGTLKRMLEKKRTS |
| 4GBR Chain:A ((13-286)) | ------------------------------SLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETL--CVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTS------FLPIQMHWYRATHQE--AINCYAEETCCDFFTNQAYAIASSIV----SFYVPLVIMVFVYSRVFQ-EAKRQLQKIDKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215601 for 1893 contacts (-113.9/contact) +
2D Compatibility (PS) -26493 + (NN) -12354 + (LL) 4364
1D Compatibility (HY) -23200 + (ID) 3200
Total energy: -276484.0 ( -146.06 by residue)
QMean score : 0.306
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