Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHEPMYYFLSMLAMSDLGLSLSSLPTVLSIFLFNAPEISSNACFAQEFFIHGFSVLES-------SVLLIMSFDRFLAIHNPLRYTSILTTVRVAQ-IGIVFSFKSMLLVLPFPFTLRNLRYCKKNQLSHSYCLHQDVMKLACSD---NR----IDVIYGFFGALCLMVDFILIAVSYTLILKTVLGI--ASKKEQL------KALNTCVSHICAVIIFYLPIINLAVVHRFARHVSPLINVLMANVLLLVPPLTNPIVYCVKTKQIRVRVVAKLCQRKI |
| 2YCZ Chain:A ((23-284)) | -------------------------------------LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI------MMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMI-FVALRV-YREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -199488 for 1595 contacts (-125.1/contact) +
2D Compatibility (PS) -24156 + (NN) -6017 + (LL) 5136
1D Compatibility (HY) -24800 + (ID) 3300
Total energy: -252625.0 ( -158.39 by residue)
QMean score : 0.228
|
|
|