Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETGNLTWVSDFVFLGLSQTRELQRFLFLMFLFVYITTVMGNILIIITVTSDSQLHTPMYFLLRNLAVLDLCFSSVTAPKMLVDLLSEKKTISYQGCMGQIFFFHFLGGAMVFFLSVMAFDRLIAISRPLRYVTVMNTQLWVGLVVATWVGGFVHSIVQLALMLPLPFCGPNILDNFYCDVPQVLRLAC--TDTSLLEFLKISNSGLLDVVWFFLLLMSYLFILVMLRSH---------PGEARR----KAASTCTTHIIVVSMIFVPSIYLY-ARPFTPFPMDK----------LVSIGHTVMTPMLNPMIYTLRNQDMQAAVRRLGRHRLV
3VG9 Chain:A ((14-304))-------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFA---IGLTPMLGWNNCGQ-------SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHT--NSVVNPFIYAYRIREFRQTFRKIIRSHVL


General information:
TITO was launched using:
RESULT:

Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -242771 for 1959 contacts (-123.9/contact) +
2D Compatibility (PS) -26193 + (NN) -11285 + (LL) 4008
1D Compatibility (HY) -20800 + (ID) 3450
Total energy: -300491.0 ( -153.39 by residue)
QMean score : 0.270

(partial model without unconserved sides chains):
PDB file : Tito_3VG9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VG9-query.scw
PDB file : Tito_Scwrl_3VG9.pdb: