Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKEQDSNVTEFVLLGLSSSWELQLFLFLLFLFFYIAIVLGNLLIVVTVQAHAHLLQSPMYYFLGHLSFIDLCLSCVTVPKMLGDFLQQGKSISFSGCLAQIYFLHFLGASEMFLLTVMAYDRYVAICNPLRYLTVMNPQLCLWLVLACWCGGFIHSIMQVILVIQLPF-CGPNELDNFYCDVPQVIKLACMDTYVVEVLVIANSGLLS-------LVCFLVLLFSYAIILITLRTHFCQGQNKVFSTCAS-HLTVVSLIFVPCVFIYLRPFCSFS----------VDKIF---SLFYTVITPMLNPLIYTLRNTDMKTAMKKLRIKPCGIPLPC |
| 4A4M Chain:A ((34-318)) | ----------------LAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKK--LRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF----------------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIYVIAFLICWLPYAGVAFYIFTHQGSCFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -295663 for 2028 contacts (-145.8/contact) +
2D Compatibility (PS) -26170 + (NN) -3948 + (LL) 3560
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -327121.0 ( -161.30 by residue)
QMean score : 0.144
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