Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYILTNLVIARICLISVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFLWLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKHKRNITEMFHVSKIPYFEPLTLFNLFAIVPFIVSLISFFLLVRSLWRHTKQIKLYAT----------------------------------------------------------------------------------------------------------------------------------------------------GSRDPSTEVHVRAIKTMTSFIFFFFLYYISSILMTFSYL-M----TKYKLAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI |
| 3V2Y Chain:A ((62-495)) | ----SIKLTSVVFILICCFIILENIFVLLTIW---KTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGA-TTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML---K---------NNFRLFLLISACWVISLILGGLPIMGW---N--C--I--SALSSCSTVLPLYHKHY-ILFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -243870 for 2024 contacts (-120.5/contact) +
2D Compatibility (PS) -27180 + (NN) -158 + (LL) 2568
1D Compatibility (HY) -18000 + (ID) 1550
Total energy: -288190.0 ( -142.39 by residue)
QMean score : 0.269
|
|
|