Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTDLILSQLALANSMVLFFKGIPQTMAAFGLKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNG--FQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRF----SSLHAVLYFSPDFMSLGFMVWASGSMVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVANP-----------GQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP |
| 2LNL Chain:A ((40-322)) | ---------------------------------------------YVVIIAYALVFLLSLLGNSLVMLVILYS---RVGRSVTDVYLLNLALADLLFALT--LPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIV-HATRTL----TQ-KRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP------NNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM--------------GQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145800 for 1899 contacts (-76.8/contact) +
2D Compatibility (PS) -26049 + (NN) 2913 + (LL) 5296
1D Compatibility (HY) -22400 + (ID) 2050
Total energy: -188090.0 ( -99.05 by residue)
QMean score : 0.107
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