Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EPNTSPSSAPSPSAGCSTIIYDMVDCVSFLSVGSKDKKPSPSCCSGFETVLNTD-------PKCICEALKSSA-ELGIDVDLKRAATLPSACGVSAP----PISNCNGENIAD
1AFH Chain:A ((2-91))
-------------ISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVS-GLNAGNAASIPSKCGVSIPYTISTSTDCSR-----
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38133 for 581 contacts (-65.6/contact) +
2D Compatibility (PS) -8010 + (NN) -93 + (LL) 256
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -51230.0 ( -88.18 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: