Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCFMFLEFLFSTLFIMLIMVLSVFQIILVVILVILVLLQPPGSSSLSGFSNSQQGFNSIIPVKSSANPLNKITAIVAGLFIMNTLLLSGLCSKDVHKKSIAEKIILEKQQENESTSVPFEN
3TZ1 Chain:B ((1-24))
-------------------------------------------------------------------------------------------GLSPEKKKMLKKLIMQKAAEDLAN------
General information:
TITO was launched using:
RESULT:
Template:
3TZ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8209 for 93 contacts (88.3/contact) +
2D Compatibility (PS) -2729 + (NN) -2283 + (LL) 8436
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 10133.0 ( 108.96 by residue)
QMean score : 0.910
(partial model without unconserved sides chains):
PDB file :
Tito_3TZ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZ1-query.scw
PDB file :
Tito_Scwrl_3TZ1.pdb
: