Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESFNDLAPVIHQSRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESKDVYFAEFGWLDPNG-KTKVPDSKTFWQAEKT-ELT----NQKAVNLFWNNENGIVFRMKVSLD-NNYMFKVEQIVENNTKDNVVLVPYGKINRKRDN-INESYWISHEGILGAFD-NKLEEWTYKNVAKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKNILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLKQHKETIALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFTLFGLFNYNFPISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFSSFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVENTNS |
| 3WVF Chain:A ((56-528)) | ----------------------------------------------------------------GQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNS-TQPFQLLETSP-QFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLP------HTFRGAAYSTPDEKYEKYKFDTIADNE-NLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTAN--L-GNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVA-----PHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYI-----------------LPILMGVTMFFIQ---------------KIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQ-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215859 for 3487 contacts (-61.9/contact) +
2D Compatibility (PS) -45942 + (NN) -8038 + (LL) 9536
1D Compatibility (HY) -38800 + (ID) 6200
Total energy: -305303.0 ( -87.55 by residue)
QMean score : 0.338
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