Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIENIQQEFFPLFDKIKKEGDPIYNARVGFNIVKSLIERGTGWNKDEIYEVLQKELNKMERAQQELEKEAERVLSRYIIDDDVKGAVKGVSIYGNHASIKLEDNKKEFKISEFLNSDFCQKNGISGFSTLHRDEKSGMHGFVAEEGEGKDKRKVRHYVVTDGSYEMTLNWYDKEGKKCTIRININANSIKLIGGNITEEQLKDLSKANWDVKIGGLFLHEIEFRKTRENEINMSFETAIKIFGRSIQTTDMNREIGSQNAMTSTTNSHAPTKENPPLPPHRVSSLKKGVEQRKTKSLDHQSNGQKVEFNKYIQSNTLDLHELNSMNVPKLLELLKKEQNTTQINLGWNSIDNKNAEKLFRQRGLVIMANCREEENPGDQGYNLQSLFEVPTPSPLRTSSLKKNVSDEQGENISFKPISQSQDNRQKDERYDNLTFVMFRYTTSGRKKTVTEEDLQVKSAVFALPTQDVTLKKVEGTFKSEDAKKSDNMRDKQTSQDGVASILARRAEIEFLYSESERGDGLSDPEDDRSGNKDEYLTLLNPQSDDKNAKRGEKYENCDCNDNLEHIYENTDWLCDDKQDNRQRDKRYDNHTFAMFVYTLPGSKRPDDLHRNEQKLDNQQQPEIQQQGQSHSRPQSDSKGNLDVKGIQPSALSEDGDRPIS---TSTDKRNTKQLEYGK-NSKDHNSETCMVPSKPAGKESKSIQFTNPSNQMVGKLEKVLKKLDRE----SEKTVQQVAEGSVSINKPLSSVSTDGNMDAEQNSHTQSEETNLSTPEKTNVNSSTSFKELEQRLSQKNYELKKISSKVRYISPQTKEYLMEAELLKDSSTDIRKAIERKNAHTSPTTDKNSELYKLLEKDKTQLKVRVIEKVVEGASAKHTDNYDRNRITLGNKNRKLLWTKHVKQQQEKGKGISI |
2OYB Chain:O ((102-271)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKSDGSTLVSKYVTSKDKSST----YEKFNEKGEVSEKYITRA-----DGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEKTTLVVKEGTVTLSK---NISKSGEVSVELN----DTDSSAATKKTAAWNSGTSTLTITVN-SKKTKDLVFTSSN----TITVQQYDSNGTSLEGSAVEITKLDEIKNALK------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 101399 for 1032 contacts (98.3/contact) +
2D Compatibility (PS) -16678 + (NN) 1944 + (LL) 40544
1D Compatibility (HY) -3200 + (ID) 2600
Total energy: 121409.0 ( 117.64 by residue)
QMean score : 0.165
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