Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MDIIKFVLLLPTILLILTAGV-YLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILG------GNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKN----GRFIGGPMAYMVDAFNSRKATVVFLVIMIM-------VSIIVG-------------NLVQVNSLSIPLDMINVPVVTG--GIIMTIIFF----VVAALSLKKIKIFISAMIPIMTISYLTLCGIILFKFSE----------------NILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQV-GTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITII---SPFIVAFIVFITT------MVLLV-----TDSWVTGLE----------STNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQ--TIRYVSQ---NDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRD------PEVFTVSSRYLKLNQPIFNKNKTRNW-------------------LAILILRG--- |
| 1NBW Chain:A ((2-607)) | PLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGMKGTRDNIAGTLAALEQALAKTPWSMSDVSRIYLNEAAPVIGDVAMETITETIITESTMIGHNPQTPGGVGVGVGTTIALGRLATLPAAQYAEGWIVLIDDAVDFLDAVWWLNEALDRGINVVAAILKKDDGVLVNNRLRKTLPVVDEVTLLEQVPEGVMAAVEVAAPGQVVRILSNPYGIATFFGLSPEETQAIVPIARALIGNRSAVVLKTPQGDVQSRVIPAGNLYISGEKRRGEADVAEGAEAIMQAMSACAPVRDIRGEPGTHAGGMLERVRKVMASLTGHEMSAIYIQDLLAVDTFIPRKVQGGMAGECAMENAVGMAAMVKADRLQMQVIARELSARLQTEVVVGGVEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSLLIKTELGLE--DLSLAEAIKKYPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPIDNASPLEKIRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -423418 for 3373 contacts (-125.5/contact) +
2D Compatibility (PS) -49122 + (NN) -5191 + (LL) 296
1D Compatibility (HY) -12000 + (ID) 3500
Total energy: -492935.0 ( -146.14 by residue)
QMean score : 0.143
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