Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKSQLVKKVFDSVAYRYDIMNDIISLGIHRLWKDKMVNSVHF---TKNSQVLDVAGGTGDIAIRIVRREPSVQVTVCDINQNMLSRGRNKAINSNQLNFNWVCANAESLPFEDSEFDCCTIAFGIRNVSDRKKALSEIHRVLKPNGQFICLEFAPMH------YKNEIFTKLYDLYSLKVIPKIGNIVTKDESPYQYLVRSIREFPVQTDFKMEIEEVGFKKVKFHNMSYGIVALHTGTK |
4KRI Chain:A ((192-359)) | --------------AYEWIFGNNFISPGG---WNQNLAILKRFGPMKTGQRMLDIGVGIGGGA-RQAASEFGLQVHGVDLSTNMLAVALERVHKEKDARVTYAVCDACEYEFEPNSFDYVFSRDCIQHIKDTDKLFSRIYRALKPGGKVLITMYGVGHGTLSESFKEYVSQRQYYLKNLEQIEEIAKKTGFIDIEVENMTPRFKEILLEERERIEQDKETFLAKFSQNAYDGLVSGWKSKL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66009 for 1231 contacts (-53.6/contact) +
2D Compatibility (PS) -17013 + (NN) -3602 + (LL) 1716
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -95058.0 ( -77.22 by residue)
QMean score : 0.379
|
|
|