Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLLEADPIYKPFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKIKLLNVEKNLLTQIFRFFTQADIEVNNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESEYQAFLKY----DAMRKKYEYMLEFEESKKHDKKHVAKTL---AVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQIIAWSARDETLHTNSIINLFNTFIKENNEIWNDEFKEGLYSACRTIVGLEDEFIKLAFDLGD-VEGLSAEEVRNYIRYIANRRLMQLGL-KPIYDINDNPLPWLDEILNGVEHTNFFENRVTEYSRAATQGTWEEAFTEDDTNNKER |
| 2RCC Chain:A ((38-313)) | --------------FSWAYPLYKNMLANFWTPFEINMSHDAKQFPT-LTETEQEAFKKIIGLLAFLD-SVQTDYSMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSL-VPKATQDEIFEYWKHDDVLKERNEFIIDGYE--KFVDNPTPKTFLESIVYDVILEGLNFYSGFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFR--YIIGDKIPGINPEDMETYISFIANKRAVQLGMEKPYPEIKHNPMKWI------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2RCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -162680 for 2017 contacts (-80.7/contact) +
2D Compatibility (PS) -28550 + (NN) -16748 + (LL) 3800
1D Compatibility (HY) -20800 + (ID) 3600
Total energy: -228578.0 ( -113.33 by residue)
QMean score : 0.489
|
|
|