Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITLNNLNCCTKFGIELEFYTEGIEREHLFLNSVKNKIALLGFSCKKESSTHQYEIKSGCYNDSNNLIKHFDLAKELLTETAQKLGGNTSFKAKPYLDRAGSALNVHVNLVDSNNSNLFYCNEQKY---SDYLIYGIGGLCAMMKEHMSFFAPSDDSYLRFQYPDIHTPTTISWGVNNRTAAIRIPCLGSKC---RLEHRVPGADCNLEKVLIAIIEGITFGIENKIAPPNRVYGIASDPQYKMENLV |
2WHI Chain:A ((252-405)) | ------------------------------------------------------------------------LYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLW-KDGAPLMY-DETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRL-VPGYEAPINLVYSQRNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEEAASI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WHI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73902 for 1046 contacts (-70.7/contact) +
2D Compatibility (PS) -15517 + (NN) -7399 + (LL) 4524
1D Compatibility (HY) -5600 + (ID) 2500
Total energy: -100394.0 ( -95.98 by residue)
QMean score : 0.448
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