Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSRLHCFVGYFDELLILLYLKLKWYY--VIKYCYCCKFSEIDLIVSKKKELIFIEVKASLLGEDILISYLQYQSIVNSSKYFLSEKLSFLDYPIRYDLCFLSLTKRACLYKKCLA
3HRL Chain:A ((5-47))
----------SEAEAKLWQHLRAGRLNGYKFRRQQPMGNYIVDFMCVTPKLIVEADGVYDHARTVYLNSLGFTVLRFWNHEILQQTNDVLAEILRVLQELEK--------------
General information:
TITO was launched using:
RESULT:
Template:
3HRL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33297 for 213 contacts (-156.3/contact) +
2D Compatibility (PS) -4127 + (NN) -188 + (LL) 2300
1D Compatibility (HY) 1200 + (ID) 200
Total energy: -34312.0 ( -161.09 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_3HRL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HRL-query.scw
PDB file :
Tito_Scwrl_3HRL.pdb
: